By María Botón-Fernández, Carlos Martín-Vide, Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez
This publication constitutes the court cases of the 3rd InternationalConference on Algorithms for Computational Biology, AlCoB 2016, held inTrujillo, Spain, in June 2016.
The thirteen complete papers awarded during this quantity have been conscientiously reviewed andselected from 23 submissions. they're prepared within the following topical sections: organic networks and modelling; organic constitution processing; phylogenetics; and series research and rearrangement. furthermore one invited speak is included.
Read Online or Download Algorithms for Computational Biology: Third International Conference, AlCoB 2016, Trujillo, Spain, June 21-22, 2016, Proceedings PDF
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Additional resources for Algorithms for Computational Biology: Third International Conference, AlCoB 2016, Trujillo, Spain, June 21-22, 2016, Proceedings
5, we present a description of feeding adaptations of Daphnia. We apply the new proposed methods to the model presented to compare short-term and long-term strategies of nutrients uptake by Daphnia. Numerical results are also given. Conclusions are being presented in Sect. 6. 2 The Optimal Control Problem We consider the nonlinear control problem governed by parabolic equations with delays in state and control variables subject to control and state constraints. Let x(p, t) ∈ Rn and u(p, t) ∈ Rm denote the state and control variable, respectively in a given space-time domain Q = [a, b] × [t0 , tf ].
The simulation was run for 6000 s and the time series results of each interface species were collected. For our method we are interested in analyzing all knock-out mutants where the interface species are active/inactive in all possible combinations. In the knock-out mutants the initial values of the inactive interface species are set to the value 0, while the active interface species are set to a speciﬁc threshold value of 1 % of that species’ maximum value in the simulation of the basic model up to 6000 s.
A reduction of logical regulatory graphs preserving essential dynamical properties. , Gorrieri, R. ) CMSB 2009. LNCS, vol. 5688, pp. 266–280. Springer, Heidelberg (2009) 8. : Logical Analysis of Hybrid Systems: Proving Theorems for Complex Dynamics. Springer, Heidelberg (2010) 9. : Multistationarity, the basis of cell diﬀerentiation and memory. II. Logical analysis of regulatory networks in terms of feedback circuits. Chaos Interdisc. J. Nonlinear Sci. 11(1), 180–195 (2001) 10. : Interconnection of asynchronous boolean networks, asymptotic and transient dynamics.
Algorithms for Computational Biology: Third International Conference, AlCoB 2016, Trujillo, Spain, June 21-22, 2016, Proceedings by María Botón-Fernández, Carlos Martín-Vide, Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez